4. Conclusion
In this study, we report the identification and characterization of viruses from five Biomphalaria snail strains from RNAseq data. We discovered the presence of at least 5 new RNA viruses in both B. glabrata and B. pfeifferi species. The analysis of their sequence and genome organization revealed that four viruses were associated with the picorna-like virus superfamily, while the fifth one is close to the Totiviridae family. These results are supported by a phylogenetic analysis based on the RdRP and helicase protein sequences. The distribution analysis showed that BV1 was present in all the 5 snail strains while the four others were not equally distributed. Some of them, such as BV2 and BV3, seem to have a geographic-specific origin while others, such as BV4 and BV5, might be species-specific as they were only recovered from B. pfeifferi. BV1 is clearly the most abundant virus in B. glabrata, while it is BV4 in B. pfeifferi.
This work is a first step towards the identification of natural biological agents able to infect several populations of Biomphalaria, which is the intermediate host of the parasite S. mansoni. Future work will investigate viral prevalence at individual level, but also in field populations. The viral tropism, as well as the mode of transmission, has to be studied to better understand the different steps of the contamination process. The role played by these viruses on snail homeostasis also has to be investigated and more particularly during S. mansoni parasite infection to know if the presence of these viruses would be adaptive for the host.